BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022C01SP1|AL427870
(934 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig410 529 e-150
>3x_Contig410
Length = 1641
Score = 529 bits (266), Expect = e-150
Identities = 266/266 (100%)
Strand = Plus / Minus
Query: 9 gttgttgggacatgtgcttaaacatagttgccaaaacttgtgacaccgcgtagaaccgtt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gttgttgggacatgtgcttaaacatagttgccaaaacttgtgacaccgcgtagaaccgtt 207
Query: 69 ctggggtcgcgcatacgaactggagtccgttatcgtctaataatattttctgtaagatga 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctggggtcgcgcatacgaactggagtccgttatcgtctaataatattttctgtaagatga 147
Query: 129 agatagcgacgatcttcgaaagttctgaagagttttccatgattcttaaacataatggga 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agatagcgacgatcttcgaaagttctgaagagttttccatgattcttaaacataatggga 87
Query: 189 taatatctgtccttagaaggaaactgatcacttctgcagaatcgtttttcactagagcac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 taatatctgtccttagaaggaaactgatcacttctgcagaatcgtttttcactagagcac 27
Query: 249 cgatgacacctagtgaagttagcctt 274
||||||||||||||||||||||||||
Sbjct: 26 cgatgacacctagtgaagttagcctt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5979
Number of Sequences: 1807
Number of extensions: 5979
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)